Pseudomonas putida B6-2

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas putida B6-2 is a Gram-negative, rod-shaped bacterium that thrives in soil and wastewater environments. As a heterotroph, it utilizes organic compounds as its energy source, demonstrating versatility in nutrient acquisition. This species is characterized by its facultative anaerobic nature, allowing it to grow in both the presence and absence of oxygen. Pseudomonas putida B6-2 is motile, equipped with flagella that facilitate movement through its habitat. The bacterium has a mesophilic temperature range, indicating optimal growth at moderate temperatures, which aligns with typical environmental conditions found in soil and wastewater. Structurally, Pseudomonas putida B6-2 contains one replicon and is surrounded by two membranes, a characteristic feature of Gram-negative bacteria. This arrangement plays a significant role in its physiology and interactions with the environment. The biotic relationship of Pseudomonas putida B6-2 is classified as free-living, suggesting that it does not rely on a host organism for survival. This independence allows it to play an essential role in nutrient cycling within its ecosystems. Given its adaptability and metabolic capabilities, Pseudomonas putida B6-2 may contribute significantly to bioremediation processes in contaminated environments, effectively breaking down pollutants and enhancing soil health. Its presence in wastewater treatment indicates its potential application in environmental biotechnology, underlining the ecological importance of this bacterium. The accession number for further genetic information is NZ_CP015202.1.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas putida
StrainB6-2

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas putida B6-2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil - Wastewater
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas putida B6-2 chromosome, complete genome.

Gene Summary

Adenine Count

1236367 bp

Thymine Count

1215279 bp

Guanine Count

1941870 bp

Cytosine Count

1983755 bp

Genome Length

6377271 bp

Protein-coding Genes

5604 genes

Non-Coding Genes

266 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methyl-accepting chemotaxis protein mcpuKKK_RS11000Not AvailablePositive2409910 - 241197673637.5
cation diffusion facilitator family transporterKKK_RS11005Not AvailablePositive2412119 - 241307834715.6
Trna-lysNot AvailableNot AvailablePositive2413171 - 2413246Not Available
7-cyano-7-deazaguanine synthase quecKKK_RS11015Not AvailableNegative2413307 - 241398123990.5
7-carboxy-7-deazaguanine synthase queeKKK_RS11020Not AvailableNegative2413999 - 241464624097.4
tol-pal system protein ybgfKKK_RS11025Not AvailableNegative2414815 - 241562128731.6
peptidoglycan-associated lipoprotein palKKK_RS11030Not AvailableNegative2415628 - 241612817833.9
tol-pal system beta propeller repeat protein tolbKKK_RS11035Not AvailableNegative2416183 - 241745446253.0
cell envelope integrity protein tolaKKK_RS11040Not AvailableNegative2417481 - 241859940180.3
protein tolrKKK_RS11045Not AvailableNegative2418599 - 241905116248.1

Displaying genes 2311 – 2320 of 5870 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.