Hyunsoonleella pacifica str. SW033

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Hyunsoonleella

Description

Hyunsoonleella pacifica str. SW033 is classified as a Gram-negative bacterium characterized by its rod-shaped morphology. This organism possesses a single replicon, which indicates a streamlined genetic structure that may contribute to its adaptability and efficiency in various environments. The reference accession for this strain is SIRS00000000.1, providing a basis for further genomic studies and comparisons with other microbial species. The Gram-negative classification of H. pacifica str. SW033 suggests that it has a distinctive cell wall structure, characterized by a thin peptidoglycan layer surrounded by an outer membrane containing lipopolysaccharides. This structural feature can influence its interactions with the environment, including its susceptibility to antibiotics and its role in ecological systems. In terms of ecological insights, the traits of H. pacifica str. SW033 suggest potential functions in biogeochemical cycles, particularly in marine or coastal ecosystems, given the species name “pacifica.” The rod shape may facilitate motility and nutrient uptake, allowing this bacterium to thrive in its habitat. Understanding the specific ecological role of H. pacifica str. SW033 could provide valuable information on microbial diversity and the functioning of microbial communities in marine environments. Further research may elucidate its interactions and contributions to ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusHyunsoonleella
SpeciesHyunsoonleella pacifica
StrainSW033

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hyunsoonleella pacifica strain SW033 contig34, whole genome

Gene Summary

Adenine Count

1386773 bp

Thymine Count

1391163 bp

Guanine Count

674099 bp

Cytosine Count

675569 bp

Genome Length

4127878 bp

Protein-coding Genes

3450 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
yggs family pyridoxal phosphate-dependent enzymeEYD46_03670Not AvailableNegative908328 - 90900225311.8
m23 family metallopeptidaseEYD46_03675Not AvailableNegative909060 - 90968023343.7
3-hydroxybutyryl-coa dehydrogenaseEYD46_03680Not AvailableNegative909687 - 91058032234.5
gfo/idh/moca family oxidoreductaseEYD46_03685Not AvailableNegative910664 - 91162335421.9
protein-l-isoaspartate(d-aspartate) o-methyltransferaseEYD46_03690Not AvailablePositive911960 - 91260423791.1
hypothetical proteinEYD46_03695Not AvailableNegative912624 - 91397349791.8
methyltransferase domain-containing proteinEYD46_03700Not AvailableNegative914011 - 91461923825.7
giy-yig nuclease family proteinEYD46_03705Not AvailableNegative914673 - 91498112463.8
pyridoxamine 5'-phosphate oxidase family proteinEYD46_03710Not AvailableNegative915039 - 91558720915.0
xaa-pro dipeptidyl-peptidaseEYD46_03715Not AvailableNegative915613 - 91742767306.5

Displaying genes 731 – 740 of 3502 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.