Hyunsoonleella pacifica str. SW033

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Hyunsoonleella

Description

Hyunsoonleella pacifica str. SW033 is classified as a Gram-negative bacterium characterized by its rod-shaped morphology. This organism possesses a single replicon, which indicates a streamlined genetic structure that may contribute to its adaptability and efficiency in various environments. The reference accession for this strain is SIRS00000000.1, providing a basis for further genomic studies and comparisons with other microbial species. The Gram-negative classification of H. pacifica str. SW033 suggests that it has a distinctive cell wall structure, characterized by a thin peptidoglycan layer surrounded by an outer membrane containing lipopolysaccharides. This structural feature can influence its interactions with the environment, including its susceptibility to antibiotics and its role in ecological systems. In terms of ecological insights, the traits of H. pacifica str. SW033 suggest potential functions in biogeochemical cycles, particularly in marine or coastal ecosystems, given the species name “pacifica.” The rod shape may facilitate motility and nutrient uptake, allowing this bacterium to thrive in its habitat. Understanding the specific ecological role of H. pacifica str. SW033 could provide valuable information on microbial diversity and the functioning of microbial communities in marine environments. Further research may elucidate its interactions and contributions to ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusHyunsoonleella
SpeciesHyunsoonleella pacifica
StrainSW033

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hyunsoonleella pacifica strain SW033 contig34, whole genome

Gene Summary

Adenine Count

1386773 bp

Thymine Count

1391163 bp

Guanine Count

674099 bp

Cytosine Count

675569 bp

Genome Length

4127878 bp

Protein-coding Genes

3450 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fructose-6-phosphate aldolaseEYD46_02040Not AvailablePositive536731 - 53738423478.4
trna (guanine-n1)-methyltransferaseEYD46_02045Not AvailableNegative537459 - 53808223576.2
glyceraldehyde-3-phosphate dehydrogenaseEYD46_02050Not AvailableNegative538220 - 53966853412.1
pdz domain-containing proteinEYD46_02055Not AvailableNegative539793 - 54120550580.6
diaminopimelate epimeraseEYD46_02060Not AvailablePositive541332 - 54210528784.8
n-acetyltransferaseEYD46_02065Not AvailablePositive542102 - 54262620221.2
endolytic transglycosylase mltgEYD46_02070Not AvailablePositive542628 - 54367139774.7
duf2279 domain-containing proteinEYD46_02075Not AvailablePositive543674 - 54458234726.5
peptidoglycan-binding protein lysmEYD46_02080Not AvailablePositive544694 - 54535924593.7
sam-dependent methyltransferaseEYD46_02085Not AvailableNegative545364 - 54608026572.6

Displaying genes 411 – 420 of 3502 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.