Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Flectobacillaceae
Genus
Pseudarcicella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Flectobacillaceae |
| Genus | Pseudarcicella |
| Species | Pseudarcicella hirudinis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1898889 bp
Thymine Count
1895842 bp
Guanine Count
1189278 bp
Cytosine Count
1176773 bp
Genome Length
6168047 bp
Protein-coding Genes
5010 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| choline dehydrogenase | SAMN04515674_101555 | Not Available | Positive | 645660 - 647378 | 64487.3 |
| deoxyadenosine/deoxycytidine kinase | SAMN04515674_101556 | Not Available | Negative | 647471 - 648082 | 23495.9 |
| hypothetical protein | SAMN04515674_101557 | Not Available | Negative | 648168 - 648317 | 6016.41 |
| upf0176 protein | SAMN04515674_101558 | Not Available | Positive | 648325 - 649311 | 37724.8 |
| ribosomal protein s18 acetylase rimi | SAMN04515674_101559 | Not Available | Negative | 649396 - 649890 | 19068.1 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferases | SAMN04515674_101560 | Not Available | Negative | 649965 - 650537 | 21784.8 |
| 5'-nucleotidase /3'-nucleotidase /exopolyphosphatase | SAMN04515674_101561 | Not Available | Positive | 650707 - 651483 | 28097.5 |
| gh3 auxin-responsive promoter | SAMN04515674_101562 | Not Available | Positive | 651545 - 653089 | 58971.9 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN04515674_101563 | Not Available | Negative | 653142 - 653756 | 22854.6 |
| 8-oxo-dgtp pyrophosphatase mutt, nudix family | SAMN04515674_101564 | Not Available | Negative | 653773 - 654348 | 21533.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
