Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Flectobacillaceae
Genus
Pseudarcicella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Flectobacillaceae |
| Genus | Pseudarcicella |
| Species | Pseudarcicella hirudinis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1898889 bp
Thymine Count
1895842 bp
Guanine Count
1189278 bp
Cytosine Count
1176773 bp
Genome Length
6168047 bp
Protein-coding Genes
5010 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted pyrophosphatase or phosphodiesterase, alkp superfamily | SAMN04515674_114117 | Not Available | Negative | 4962661 - 4964013 | 50071.3 |
| carboxypeptidase regulatory-like domain-containing protein | SAMN04515674_114118 | Not Available | Negative | 4964058 - 4967282 | 118894.0 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04515674_114119 | Not Available | Negative | 4967451 - 4971701 | 153263.0 |
| immunoglobulin domain-containing protein | SAMN04515674_114120 | Not Available | Negative | 4972847 - 4975695 | 101875.0 |
| hypothetical protein | SAMN04515674_114121 | Not Available | Negative | 4975923 - 4978265 | 88703.0 |
| gh3 auxin-responsive promoter | SAMN04515674_1153 | Not Available | Positive | 4979704 - 4981263 | 59927.6 |
| nudix domain-containing protein | SAMN04515674_1154 | Not Available | Positive | 4981309 - 4981818 | 19430.2 |
| nicotinamide mononucleotide transporter | SAMN04515674_1155 | Not Available | Negative | 4981815 - 4982405 | 22905.2 |
| dna-(apurinic or apyrimidinic site) lyase /endonuclease iii | SAMN04515674_1156 | Not Available | Negative | 4982411 - 4983112 | 26557.7 |
| hypothetical protein | SAMN04515674_1157 | Not Available | Negative | 4983145 - 4983399 | 9717.24 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
