Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Flectobacillaceae
Genus
Pseudarcicella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Flectobacillaceae |
| Genus | Pseudarcicella |
| Species | Pseudarcicella hirudinis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1898889 bp
Thymine Count
1895842 bp
Guanine Count
1189278 bp
Cytosine Count
1176773 bp
Genome Length
6168047 bp
Protein-coding Genes
5010 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator of sugar metabolism, deor/glpr family | SAMN04515674_11467 | Not Available | Negative | 4894469 - 4895308 | 31160.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04515674_11468 | Not Available | Positive | 4895481 - 4898669 | 115352.0 |
| starch-binding associating with outer membrane | SAMN04515674_11469 | Not Available | Positive | 4898742 - 4900271 | 55949.0 |
| gnt-i system high-affinity gluconate transporter | SAMN04515674_11470 | Not Available | Positive | 4900407 - 4901720 | 46429.6 |
| alpha-l-fucosidase | SAMN04515674_11471 | Not Available | Positive | 4901774 - 4903135 | 51972.3 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN04515674_11472 | Not Available | Positive | 4903351 - 4903821 | 16949.8 |
| 2-dehydro-3-deoxygluconokinase | SAMN04515674_11473 | Not Available | Positive | 4903922 - 4904959 | 38211.5 |
| 2-dehydro-3-deoxyphosphogluconate aldolase / (4s)-4-hydroxy-2-oxoglutarate aldolase | SAMN04515674_11474 | Not Available | Positive | 4905088 - 4905702 | 22206.0 |
| d-serine deaminase, pyridoxal phosphate-dependent | SAMN04515674_11475 | Not Available | Positive | 4905841 - 4906956 | 41910.8 |
| membrane dipeptidase | SAMN04515674_11476 | Not Available | Positive | 4907026 - 4908096 | 40021.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
