Pseudarcicella hirudinis

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Flectobacillaceae

Genus

Pseudarcicella

Description

Pseudarcicella hirudinis is a Gram-negative, aerobic bacterium characterized by its rod shape and non-motile nature. It is classified as mesophilic, with an optimal growth temperature of 25°C, indicating its preference for moderate environmental conditions. This organism possesses a single replicon and is non-spore-forming, which suggests that it relies on vegetative growth for reproduction rather than sporulation as a means of survival under adverse conditions. The specific accession number for Pseudarcicella hirudinis is FOXH00000000.1, which is useful for researchers looking to access its genomic data for further study. Understanding the traits of Pseudarcicella hirudinis is essential for determining its ecological role, particularly in environments where aerobic processes are critical. Given its non-motile characteristic, it may play a role in nutrient cycling or decomposition in habitats where it is found, likely contributing to the microbial community dynamics within its ecological niche. This bacterium's adaptation to mesophilic temperatures can also provide insight into its potential resilience and function in temperate ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyFlectobacillaceae
GenusPseudarcicella
SpeciesPseudarcicella hirudinis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudarcicella hirudinis strain E92,LMG 26720,CCM 7988 genome

Gene Summary

Adenine Count

1898889 bp

Thymine Count

1895842 bp

Guanine Count

1189278 bp

Cytosine Count

1176773 bp

Genome Length

6168047 bp

Protein-coding Genes

5010 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna-binding transcriptional regulator of sugar metabolism, deor/glpr familySAMN04515674_11467Not AvailableNegative4894469 - 489530831160.2
tonb-linked outer membrane protein, susc/raga familySAMN04515674_11468Not AvailablePositive4895481 - 4898669115352.0
starch-binding associating with outer membraneSAMN04515674_11469Not AvailablePositive4898742 - 490027155949.0
gnt-i system high-affinity gluconate transporterSAMN04515674_11470Not AvailablePositive4900407 - 490172046429.6
alpha-l-fucosidaseSAMN04515674_11471Not AvailablePositive4901774 - 490313551972.3
enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 familySAMN04515674_11472Not AvailablePositive4903351 - 490382116949.8
2-dehydro-3-deoxygluconokinaseSAMN04515674_11473Not AvailablePositive4903922 - 490495938211.5
2-dehydro-3-deoxyphosphogluconate aldolase / (4s)-4-hydroxy-2-oxoglutarate aldolaseSAMN04515674_11474Not AvailablePositive4905088 - 490570222206.0
d-serine deaminase, pyridoxal phosphate-dependentSAMN04515674_11475Not AvailablePositive4905841 - 490695641910.8
membrane dipeptidaseSAMN04515674_11476Not AvailablePositive4907026 - 490809640021.5

Displaying genes 4051 – 4060 of 5068 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.