Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Flectobacillaceae
Genus
Pseudarcicella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Flectobacillaceae |
| Genus | Pseudarcicella |
| Species | Pseudarcicella hirudinis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1898889 bp
Thymine Count
1895842 bp
Guanine Count
1189278 bp
Cytosine Count
1176773 bp
Genome Length
6168047 bp
Protein-coding Genes
5010 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04515674_106253 | Not Available | Positive | 3174410 - 3175525 | 41195.4 |
| protein of unknown function | SAMN04515674_106254 | Not Available | Negative | 3175879 - 3176985 | 42376.0 |
| fecr protein | SAMN04515674_106255 | Not Available | Positive | 3177266 - 3178273 | 39065.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04515674_106256 | Not Available | Positive | 3178359 - 3181544 | 115716.0 |
| starch-binding associating with outer membrane | SAMN04515674_106257 | Not Available | Positive | 3181567 - 3183132 | 59157.6 |
| arabinan endo-1,5-alpha-l-arabinosidase | SAMN04515674_106258 | Not Available | Positive | 3183225 - 3184718 | 55574.8 |
| alpha-l-arabinofuranosidase | SAMN04515674_106259 | Not Available | Positive | 3185067 - 3187058 | 74462.6 |
| arabinan endo-1,5-alpha-l-arabinosidase | SAMN04515674_106260 | Not Available | Positive | 3187075 - 3188109 | 38692.2 |
| hamp domain-containing protein | SAMN04515674_106261 | Not Available | Negative | 3188156 - 3189403 | 47881.5 |
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | SAMN04515674_106262 | Not Available | Negative | 3189438 - 3190814 | 51649.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
