Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Flectobacillaceae
Genus
Pseudarcicella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Flectobacillaceae |
| Genus | Pseudarcicella |
| Species | Pseudarcicella hirudinis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1898889 bp
Thymine Count
1895842 bp
Guanine Count
1189278 bp
Cytosine Count
1176773 bp
Genome Length
6168047 bp
Protein-coding Genes
5010 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component transcriptional regulator, lyttr family | SAMN04515674_105257 | Not Available | Positive | 2716241 - 2716999 | 29203.5 |
| chloride channel protein, cic family | SAMN04515674_105258 | Not Available | Positive | 2717115 - 2718410 | 47080.7 |
| l-threonine aldolase | SAMN04515674_105259 | Not Available | Negative | 2718483 - 2719496 | 37293.8 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN04515674_105260 | Not Available | Positive | 2719579 - 2720502 | 33560.3 |
| carbohydrate family 9 binding domain-like | SAMN04515674_105261 | Not Available | Negative | 2720468 - 2722744 | 86515.8 |
| protein of unknown function | SAMN04515674_105262 | Not Available | Negative | 2722908 - 2724185 | 49446.0 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | SAMN04515674_105263 | Not Available | Negative | 2724154 - 2724825 | 24995.3 |
| 4a-hydroxytetrahydrobiopterin dehydratase | SAMN04515674_105264 | Not Available | Negative | 2724859 - 2725092 | 9045.62 |
| cytochrome c peroxidase | SAMN04515674_105265 | Not Available | Positive | 2725486 - 2726682 | 44743.4 |
| methionine aminopeptidase, type i | SAMN04515674_105266 | Not Available | Negative | 2726773 - 2727537 | 28294.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
