Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Flectobacillaceae
Genus
Pseudarcicella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Flectobacillaceae |
| Genus | Pseudarcicella |
| Species | Pseudarcicella hirudinis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1898889 bp
Thymine Count
1895842 bp
Guanine Count
1189278 bp
Cytosine Count
1176773 bp
Genome Length
6168047 bp
Protein-coding Genes
5010 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | SAMN04515674_10595 | Not Available | Positive | 2506849 - 2507520 | 24585.6 |
| catechol 2,3-dioxygenase | SAMN04515674_10596 | Not Available | Positive | 2507585 - 2508112 | 20201.2 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04515674_10597 | Not Available | Positive | 2508234 - 2508818 | 22241.0 |
| hypothetical protein | SAMN04515674_10598 | Not Available | Positive | 2509095 - 2509544 | 16889.8 |
| phenazine biosynthesis protein phzf family | SAMN04515674_10599 | Not Available | Positive | 2509663 - 2510481 | 30223.2 |
| predicted oxidoreductase | SAMN04515674_105100 | Not Available | Positive | 2510681 - 2511655 | 35798.0 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04515674_105101 | Not Available | Positive | 2511759 - 2512778 | 37046.7 |
| arac-type dna-binding protein | SAMN04515674_105102 | Not Available | Positive | 2512909 - 2513724 | 31561.3 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN04515674_105103 | Not Available | Negative | 2513839 - 2515251 | 51886.6 |
| hydrophobe/amphiphile efflux-1 (hae1) family protein | SAMN04515674_105104 | Not Available | Negative | 2515251 - 2518406 | 114447.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
