Pseudarcicella hirudinis

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Flectobacillaceae

Genus

Pseudarcicella

Description

Pseudarcicella hirudinis is a Gram-negative, aerobic bacterium characterized by its rod shape and non-motile nature. It is classified as mesophilic, with an optimal growth temperature of 25°C, indicating its preference for moderate environmental conditions. This organism possesses a single replicon and is non-spore-forming, which suggests that it relies on vegetative growth for reproduction rather than sporulation as a means of survival under adverse conditions. The specific accession number for Pseudarcicella hirudinis is FOXH00000000.1, which is useful for researchers looking to access its genomic data for further study. Understanding the traits of Pseudarcicella hirudinis is essential for determining its ecological role, particularly in environments where aerobic processes are critical. Given its non-motile characteristic, it may play a role in nutrient cycling or decomposition in habitats where it is found, likely contributing to the microbial community dynamics within its ecological niche. This bacterium's adaptation to mesophilic temperatures can also provide insight into its potential resilience and function in temperate ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyFlectobacillaceae
GenusPseudarcicella
SpeciesPseudarcicella hirudinis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudarcicella hirudinis strain E92,LMG 26720,CCM 7988 genome

Gene Summary

Adenine Count

1898889 bp

Thymine Count

1895842 bp

Guanine Count

1189278 bp

Cytosine Count

1176773 bp

Genome Length

6168047 bp

Protein-coding Genes

5010 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alpha amylase, catalytic domainSAMN04515674_10316Not AvailableNegative1393479 - 139409623807.5
alpha amylase, catalytic domainSAMN04515674_10317Not AvailableNegative1394096 - 139531647637.9
predicted hydrolase of the alpha/beta superfamilySAMN04515674_10318Not AvailableNegative1395368 - 139620131920.6
hypothetical proteinSAMN04515674_10319Not AvailableNegative1396449 - 139694618998.8
outer membrane protein beta-barrel domain-containing proteinSAMN04515674_10320Not AvailablePositive1397345 - 139833436934.0
atp-dependent lon proteaseSAMN04515674_10321Not AvailableNegative1398414 - 140090092969.8
hypothetical proteinSAMN04515674_10322Not AvailablePositive1400910 - 14010083643.47
hypothetical proteinSAMN04515674_10323Not AvailableNegative1401175 - 140172921692.1
site-2 protease. metallo peptidase. merops family m50bSAMN04515674_10324Not AvailableNegative1401828 - 140321951499.3
1-deoxy-d-xylulose 5-phosphate reductoisomeraseSAMN04515674_10325Not AvailableNegative1403293 - 140444442107.2

Displaying genes 1201 – 1210 of 5068 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.