Seleniivibrio woodruffii str. DSM 24984

rodanaerobic

Kingdom

Pseudomonadati

Phylum

Deferribacterota

Class

Deferribacteres

Order

Deferribacterales

Family

Geovibrionaceae

Genus

Seleniivibrio

Description

Seleniivibrio woodruffii str. DSM 24984 is a Gram-negative, rod-shaped bacterium characterized by its anaerobic respiration. This species thrives optimally at 32°C, indicating its mesophilic nature, which suggests it prefers moderate temperature conditions for growth. Notably, S. woodruffii str. DSM 24984 possesses a single replicon, reflecting its genomic structure. It is also important to highlight that this bacterium is non-spore-forming, which may influence its survival strategies in various environments, as it relies on other mechanisms to endure unfavorable conditions. The anaerobic lifestyle of Seleniivibrio woodruffii suggests it plays a significant role in environments where oxygen is limited, such as deep-sea sediments or other anoxic habitats. This ecological niche could facilitate the cycling of nutrients and the degradation of organic matter in these environments. The organism's metabolic processes may contribute to biogeochemical cycles, particularly involving selenium or other elements, aligning with its genus name, which indicates a possible association with selenium compounds. Overall, the characteristics of Seleniivibrio woodruffii str. DSM 24984 underscore its potential ecological significance in anaerobic environments, where it may engage in unique metabolic activities that impact the surrounding ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumDeferribacterota
ClassDeferribacteres
OrderDeferribacterales
FamilyGeovibrionaceae
GenusSeleniivibrio
SpeciesSeleniivibrio woodruffii
StrainDSM 24984

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Seleniivibrio woodruffii strain DSM 24984 Ga0215702_109, whole

Gene Summary

Adenine Count

754610 bp

Thymine Count

750133 bp

Guanine Count

699803 bp

Cytosine Count

701308 bp

Genome Length

2906047 bp

Protein-coding Genes

2688 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cobalt/nickel transport proteinC8D98_0564Not AvailablePositive607259 - 60801128116.2
cobalt/nickel transport system permease proteinC8D98_0565Not AvailablePositive608015 - 60862321583.1
nickel transport proteinC8D98_0566Not AvailablePositive608613 - 60912818372.2
cobalt/nickel transport system permease proteinC8D98_0567Not AvailablePositive609125 - 60978125000.3
cobalt/nickel transport system atp-binding proteinC8D98_0568Not AvailablePositive609778 - 61042823620.9
putative mn2+ efflux pump mntpC8D98_0569Not AvailablePositive610507 - 61104919712.8
glycogen synthase (adp-glucose)C8D98_0570Not AvailablePositive611101 - 61255553363.5
drug/metabolite transporter (dmt)-like permeaseC8D98_0571Not AvailableNegative612539 - 61342032351.9
Trna-metNot AvailableNot AvailablePositive613487 - 613563Not Available
leucyl aminopeptidaseC8D98_0573Not AvailablePositive613708 - 61520155460.6

Displaying genes 561 – 570 of 723 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.