Seleniivibrio woodruffii str. DSM 24984

rodanaerobic

Kingdom

Pseudomonadati

Phylum

Deferribacterota

Class

Deferribacteres

Order

Deferribacterales

Family

Geovibrionaceae

Genus

Seleniivibrio

Description

Seleniivibrio woodruffii str. DSM 24984 is a Gram-negative, rod-shaped bacterium characterized by its anaerobic respiration. This species thrives optimally at 32°C, indicating its mesophilic nature, which suggests it prefers moderate temperature conditions for growth. Notably, S. woodruffii str. DSM 24984 possesses a single replicon, reflecting its genomic structure. It is also important to highlight that this bacterium is non-spore-forming, which may influence its survival strategies in various environments, as it relies on other mechanisms to endure unfavorable conditions. The anaerobic lifestyle of Seleniivibrio woodruffii suggests it plays a significant role in environments where oxygen is limited, such as deep-sea sediments or other anoxic habitats. This ecological niche could facilitate the cycling of nutrients and the degradation of organic matter in these environments. The organism's metabolic processes may contribute to biogeochemical cycles, particularly involving selenium or other elements, aligning with its genus name, which indicates a possible association with selenium compounds. Overall, the characteristics of Seleniivibrio woodruffii str. DSM 24984 underscore its potential ecological significance in anaerobic environments, where it may engage in unique metabolic activities that impact the surrounding ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumDeferribacterota
ClassDeferribacteres
OrderDeferribacterales
FamilyGeovibrionaceae
GenusSeleniivibrio
SpeciesSeleniivibrio woodruffii
StrainDSM 24984

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Seleniivibrio woodruffii strain DSM 24984 Ga0215702_109, whole

Gene Summary

Adenine Count

754610 bp

Thymine Count

750133 bp

Guanine Count

699803 bp

Cytosine Count

701308 bp

Genome Length

2906047 bp

Protein-coding Genes

2688 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amino acid/amide abc transporter substrate-binding protein (haat family)C8D98_0135Not AvailablePositive135547 - 13665939769.9
indolepyruvate ferredoxin oxidoreductase alpha subunitC8D98_0136Not AvailablePositive136874 - 13861663165.6
indolepyruvate ferredoxin oxidoreductase beta subunitC8D98_0137Not AvailablePositive138613 - 13912217709.8
phenylacetate-coa ligaseC8D98_0138Not AvailablePositive139106 - 14032945941.6
putative membrane protein yeihC8D98_0139Not AvailableNegative140431 - 14103921492.0
putative abc transport system permease proteinC8D98_0140Not AvailableNegative141036 - 14178226358.5
Ncrna_class:autocatalytically_spliced_intronNot AvailableNot AvailablePositive141854 - 141954Not Available
pas domain s-box-containing proteinC8D98_0141Not AvailablePositive141916 - 144639101348.0
signal transduction histidine kinaseC8D98_0142Not AvailablePositive144721 - 147438101504.0
drug/metabolite transporter (dmt)-like permeaseC8D98_0143Not AvailableNegative147425 - 14830332120.3

Displaying genes 131 – 140 of 723 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.