Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| riboflavin synthase alpha chain | SAMN05216227_1005140 | Not Available | Positive | 818808 - 819410 | 21143.2 |
| 3,4-dihydroxy 2-butanone 4-phosphate synthase / gtp cyclohydrolase ii | SAMN05216227_1005141 | Not Available | Positive | 819478 - 820578 | 39275.4 |
| 6,7-dimethyl-8-ribityllumazine synthase | SAMN05216227_1005142 | Not Available | Positive | 820582 - 821103 | 18210.8 |
| nusb antitermination factor | SAMN05216227_1005143 | Not Available | Positive | 821100 - 821576 | 17812.5 |
| hypothetical protein | SAMN05216227_1005144 | Not Available | Positive | 821647 - 821949 | 10560.4 |
| hypothetical protein | SAMN05216227_1005146 | Not Available | Negative | 822410 - 822688 | 10650.0 |
| transposase and inactivated derivatives, is5 family | SAMN05216227_10061 | Not Available | Positive | 822689 - 823309 | 23145.7 |
| s-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase | SAMN05216227_10062 | Not Available | Positive | 823901 - 825016 | 39710.1 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN05216227_10063 | Not Available | Positive | 825206 - 826591 | 49522.1 |
| amino acid adenylation domain-containing protein | SAMN05216227_10064 | Not Available | Positive | 826588 - 830484 | 135784.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
