Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 58 - 172 | 18.01 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 163 - 277 | 18.01 |
| transposase | SAMN05216227_10011 | Not Available | Negative | 1 - 273 | 10232.3 |
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | Positive | 469 - 3309 | 18.01 |
| hypothetical protein | SAMN05216227_10012 | Not Available | Negative | 935 - 2032 | 39185.9 |
| tryptophan synthase, alpha chain | SAMN05216227_10013 | Not Available | Positive | 2174 - 2965 | 27341.1 |
| glutamate-1-semialdehyde 2,1-aminomutase | SAMN05216227_10014 | Not Available | Positive | 3054 - 3821 | 27088.6 |
| glutamate-1-semialdehyde 2,1-aminomutase | SAMN05216227_10015 | Not Available | Positive | 3793 - 4116 | 11550.4 |
| 16s ribosomal rna . bacterial ssu | Not Available | Not Available | Positive | 4140 - 4226 | 18.01 |
| glutamate--putrescine ligase | SAMN05216227_10016 | Not Available | Positive | 4216 - 5607 | 50273.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
