Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, laci family | SAMN05216227_100540 | Not Available | Negative | 714069 - 715076 | 35115.1 |
| 2-deoxy-d-gluconate 3-dehydrogenase | SAMN05216227_100541 | Not Available | Negative | 715076 - 715837 | 26549.2 |
| snoal-like polyketide cyclase | SAMN05216227_100542 | Not Available | Negative | 715834 - 716856 | 37110.1 |
| sulfopropanediol 3-dehydrogenase | SAMN05216227_100543 | Not Available | Negative | 716853 - 718160 | 46870.2 |
| carbohydrate abc transporter atp-binding protein, cut1 family | SAMN05216227_100544 | Not Available | Negative | 718192 - 719241 | 37976.9 |
| carbohydrate abc transporter substrate-binding protein, cut1 family | SAMN05216227_100545 | Not Available | Positive | 719489 - 720730 | 43541.9 |
| carbohydrate abc transporter membrane protein 1, cut1 family | SAMN05216227_100546 | Not Available | Positive | 720828 - 721850 | 37470.2 |
| carbohydrate abc transporter membrane protein 2, cut1 family | SAMN05216227_100547 | Not Available | Positive | 721863 - 722744 | 32562.2 |
| snoal-like domain-containing protein | SAMN05216227_100548 | Not Available | Positive | 722750 - 723778 | 38221.6 |
| outer membrane protein ompa | SAMN05216227_100549 | Not Available | Negative | 723942 - 725864 | 64625.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
