Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc transport system atp-binding protein | SAMN05216227_100510 | Not Available | Positive | 677610 - 678398 | 27786.5 |
| zinc transport system permease protein | SAMN05216227_100511 | Not Available | Positive | 678391 - 679182 | 26999.9 |
| dimethylglycine dehydrogenase | SAMN05216227_100512 | Not Available | Positive | 679362 - 681860 | 92664.0 |
| hypothetical protein | SAMN05216227_100513 | Not Available | Positive | 682099 - 682533 | 15521.6 |
| hypothetical protein | SAMN05216227_100514 | Not Available | Negative | 682596 - 683447 | 30476.9 |
| lysozyme | SAMN05216227_100515 | Not Available | Negative | 683688 - 684479 | 29275.5 |
| glycine/d-amino acid oxidase | SAMN05216227_100516 | Not Available | Negative | 684479 - 685558 | 37228.7 |
| nucleoside-binding protein | SAMN05216227_100517 | Not Available | Negative | 685661 - 686752 | 38382.6 |
| nucleoside abc transporter membrane protein | SAMN05216227_100518 | Not Available | Negative | 686808 - 687740 | 32090.5 |
| nucleoside abc transporter membrane protein | SAMN05216227_100519 | Not Available | Negative | 687740 - 688744 | 35039.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
