Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase dde domain-containing protein | SAMN05216227_1004147 | Not Available | Positive | 668044 - 668332 | 10868.1 |
| hypothetical protein | SAMN05216227_10051 | Not Available | Negative | 668346 - 668699 | 13435.1 |
| integrase | SAMN05216227_10052 | Not Available | Negative | 668744 - 669937 | 44517.9 |
| Trna-met | Not Available | Not Available | Positive | 670103 - 670179 | Not Available |
| hypothetical protein | SAMN05216227_10054 | Not Available | Negative | 670194 - 670316 | 3963.85 |
| n-methylhydantoinase a/oxoprolinase/acetone carboxylase, beta subunit | SAMN05216227_10055 | Not Available | Negative | 670303 - 672357 | 70017.3 |
| rna polymerase, sigma 54 subunit, rpon/sigl | SAMN05216227_10056 | Not Available | Negative | 672490 - 673773 | 45483.3 |
| selenophosphate synthase | SAMN05216227_10057 | Not Available | Positive | 673921 - 676098 | 75033.4 |
| zinc transport system substrate-binding protein | SAMN05216227_10058 | Not Available | Negative | 676095 - 677063 | 33457.5 |
| fur family transcriptional regulator, zinc uptake regulator | SAMN05216227_10059 | Not Available | Positive | 677140 - 677613 | 17053.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
