Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone hsp33 | SAMN05216227_100436 | Not Available | Positive | 548877 - 549863 | 35427.0 |
| 8-oxo-dgtp pyrophosphatase mutt, nudix family | SAMN05216227_100437 | Not Available | Positive | 549853 - 550440 | 21183.5 |
| poly(a) polymerase | SAMN05216227_100438 | Not Available | Positive | 550437 - 551564 | 39547.4 |
| atp-binding cassette, subfamily b, multidrug efflux pump | SAMN05216227_100439 | Not Available | Positive | 551629 - 553470 | 66762.1 |
| atp-binding cassette, subfamily b | SAMN05216227_100440 | Not Available | Positive | 553467 - 555311 | 66389.9 |
| 23s rrna m(5)u-1939 methyltransferase | SAMN05216227_100441 | Not Available | Positive | 555308 - 556528 | 43281.4 |
| voltage-gated sodium channel | SAMN05216227_100442 | Not Available | Positive | 556549 - 557343 | 29785.2 |
| l,d-transpeptidase catalytic domain | SAMN05216227_100443 | Not Available | Positive | 557414 - 557926 | 18920.0 |
| uncharacterized conserved protein ykwd, contains cap (csp/antigen 5/pr1) domain | SAMN05216227_100444 | Not Available | Negative | 557957 - 558469 | 18556.0 |
| l,d-transpeptidase catalytic domain | SAMN05216227_100445 | Not Available | Positive | 558628 - 559221 | 22077.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
