Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN05216227_1003143 | Not Available | Negative | 498636 - 499742 | 38945.3 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05216227_1003144 | Not Available | Positive | 499819 - 501003 | 39251.1 |
| amino acid/amide abc transporter atp-binding protein 1, haat family | SAMN05216227_1003145 | Not Available | Positive | 501123 - 501905 | 28573.8 |
| hypothetical protein | SAMN05216227_1003146 | Not Available | Positive | 501898 - 501987 | 3320.0 |
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN05216227_1003147 | Not Available | Positive | 501987 - 502697 | 25435.0 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05216227_1003148 | Not Available | Positive | 502702 - 503712 | 36162.1 |
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN05216227_1003149 | Not Available | Positive | 503709 - 505010 | 46006.7 |
| dimethylglycine dehydrogenase | SAMN05216227_1003150 | Not Available | Positive | 505180 - 507603 | 88775.1 |
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | SAMN05216227_1003151 | Not Available | Negative | 507715 - 509043 | 48536.6 |
| two-component system, ntrc family, c4-dicarboxylate transport sensor histidine kinase dctb | SAMN05216227_1003152 | Not Available | Negative | 509047 - 510786 | 63514.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
