Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein ccma, bactofilin family | SAMN05216227_1003113 | Not Available | Positive | 468891 - 469424 | 18281.7 |
| uncharacterized membrane protein | SAMN05216227_1003114 | Not Available | Negative | 469473 - 470246 | 27956.3 |
| bacterial peptide chain release factor 2 (brf-2) | SAMN05216227_1003115 | Not Available | Negative | 470313 - 471440 | 41467.7 |
| penicillin-binding protein 1a | SAMN05216227_1003116 | Not Available | Negative | 471548 - 474094 | 92906.3 |
| n-acetylmuramoyl-l-alanine amidase | SAMN05216227_1003117 | Not Available | Negative | 474203 - 475468 | 44832.9 |
| aspartate/methionine/tyrosine aminotransferase | SAMN05216227_1003118 | Not Available | Negative | 475526 - 476722 | 42195.7 |
| protein-disulfide isomerase | SAMN05216227_1003119 | Not Available | Positive | 476813 - 477556 | 26753.1 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | SAMN05216227_1003120 | Not Available | Negative | 477678 - 478817 | 40105.2 |
| protein rodz, contains xre-like hth and duf4115 domains | SAMN05216227_1003121 | Not Available | Negative | 478914 - 480032 | 38841.5 |
| 5-aminolevulinate synthase | SAMN05216227_1003122 | Not Available | Negative | 480236 - 481459 | 44000.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
