Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted arabinose efflux permease, mfs family | SAMN05216227_1003103 | Not Available | Negative | 456546 - 457718 | 40564.6 |
| hypothetical protein | SAMN05216227_1003104 | Not Available | Negative | 457718 - 457936 | 7956.65 |
| dihydrolipoamide dehydrogenase | SAMN05216227_1003105 | Not Available | Negative | 457936 - 459345 | 49708.7 |
| uncharacterized conserved protein, duf924 family | SAMN05216227_1003106 | Not Available | Negative | 459457 - 460020 | 21006.3 |
| predicted arabinose efflux permease, mfs family | SAMN05216227_1003107 | Not Available | Negative | 460095 - 461372 | 45155.3 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | SAMN05216227_1003108 | Not Available | Negative | 461481 - 462539 | 37857.5 |
| protein of unknown function | SAMN05216227_1003109 | Not Available | Negative | 462536 - 465979 | 120004.0 |
| peroxiredoxin q/bcp | SAMN05216227_1003110 | Not Available | Positive | 466093 - 466554 | 16383.7 |
| uncharacterized conserved protein, contains ferritin-like duf455 domain | SAMN05216227_1003111 | Not Available | Positive | 466551 - 467381 | 30188.0 |
| murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domain | SAMN05216227_1003112 | Not Available | Positive | 467561 - 468901 | 48811.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
