Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyceraldehyde-3-phosphate dehydrogenase (nad+) | SAMN05216227_100393 | Not Available | Positive | 446031 - 447032 | 35679.8 |
| hypothetical protein | SAMN05216227_100394 | Not Available | Positive | 447223 - 447384 | 5991.31 |
| phosphopantetheine adenylyltransferase | SAMN05216227_100395 | Not Available | Negative | 447406 - 447897 | 17691.8 |
| cbs domain-containing protein | SAMN05216227_100396 | Not Available | Negative | 447991 - 448425 | 15482.1 |
| methylmalonate-semialdehyde dehydrogenase | SAMN05216227_100397 | Not Available | Positive | 448587 - 450086 | 53330.2 |
| hypothetical protein | SAMN05216227_100398 | Not Available | Positive | 450251 - 451396 | 40473.8 |
| enoyl-coa hydratase | SAMN05216227_100399 | Not Available | Positive | 451393 - 452427 | 36056.4 |
| 3-hydroxyisobutyrate dehydrogenase | SAMN05216227_1003100 | Not Available | Positive | 452424 - 453284 | 28629.6 |
| protein of unknown function | SAMN05216227_1003101 | Not Available | Positive | 453368 - 453574 | 7352.41 |
| excinuclease abc subunit a | SAMN05216227_1003102 | Not Available | Negative | 453595 - 456447 | 105101.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
