Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospholipase/carboxylesterase | SAMN05216227_10033 | Not Available | Negative | 354343 - 355002 | 22649.5 |
| dna-3-methyladenine glycosylase ii | SAMN05216227_10034 | Not Available | Negative | 354999 - 355628 | 22478.1 |
| predicted arabinose efflux permease, mfs family | SAMN05216227_10035 | Not Available | Positive | 355767 - 356996 | 42585.9 |
| hypothetical protein | SAMN05216227_10036 | Not Available | Negative | 357081 - 357869 | 28066.4 |
| lytic murein transglycosylase | SAMN05216227_10037 | Not Available | Negative | 357900 - 359144 | 44097.2 |
| squalene/phytoene synthase | SAMN05216227_10038 | Not Available | Negative | 359224 - 360000 | 28798.6 |
| 2-isopropylmalate synthase | SAMN05216227_10039 | Not Available | Negative | 359970 - 361583 | 57664.9 |
| cysteinyl-trna synthetase | SAMN05216227_100310 | Not Available | Negative | 361693 - 363084 | 50725.1 |
| uncharacterized membrane protein ygcg, contains a tpm-fold domain | SAMN05216227_100311 | Not Available | Positive | 363217 - 364101 | 31189.5 |
| opacity protein | SAMN05216227_100312 | Not Available | Negative | 364153 - 364752 | 20562.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
