Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216227_1002161 | Not Available | Positive | 344197 - 344559 | 13056.8 |
| carnitine 3-dehydrogenase | SAMN05216227_1002162 | Not Available | Positive | 344601 - 346055 | 53032.6 |
| butyryl-coa dehydrogenase | SAMN05216227_1002163 | Not Available | Positive | 346059 - 347222 | 42813.3 |
| acyl-coa synthetase (ndp forming) | SAMN05216227_1002164 | Not Available | Positive | 347504 - 349498 | 68105.6 |
| crotonobetainyl-coa hydratase | SAMN05216227_1002165 | Not Available | Positive | 349495 - 350292 | 28893.9 |
| organic hydroperoxide reductase osmc/ohra | SAMN05216227_1002166 | Not Available | Positive | 350343 - 350819 | 17155.6 |
| choline dehydrogenase | SAMN05216227_1002167 | Not Available | Positive | 350881 - 352482 | 57435.6 |
| transposase dde domain-containing protein | SAMN05216227_1002168 | Not Available | Positive | 352832 - 353111 | 10596.8 |
| transposase dde domain-containing protein | SAMN05216227_10031 | Not Available | Negative | 353112 - 353364 | 9508.55 |
| 5-methylcytosine-specific restriction endonuclease mcra | SAMN05216227_10032 | Not Available | Negative | 353592 - 354176 | 22418.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
