Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin | SAMN05216227_1002151 | Not Available | Positive | 334964 - 335416 | 15818.5 |
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN05216227_1002152 | Not Available | Positive | 335406 - 336011 | 21205.7 |
| hypothetical protein | SAMN05216227_1002153 | Not Available | Positive | 336011 - 336646 | 20907.1 |
| uncharacterized protein | SAMN05216227_1002154 | Not Available | Negative | 336647 - 338971 | 82736.5 |
| Trna-his | Not Available | Not Available | Positive | 339179 - 339255 | Not Available |
| hypothetical protein | SAMN05216227_1002156 | Not Available | Positive | 339384 - 339608 | 7527.94 |
| hypothetical protein | SAMN05216227_1002157 | Not Available | Negative | 339605 - 340042 | 16506.0 |
| peptidyl-dipeptidase dcp metallo peptidase. merops family m03a | SAMN05216227_1002158 | Not Available | Positive | 340149 - 342161 | 73366.1 |
| transcriptional regulator, arac family with amidase-like domain | SAMN05216227_1002159 | Not Available | Negative | 342237 - 343202 | 34150.1 |
| uncharacterized conserved protein, duf849 family | SAMN05216227_1002160 | Not Available | Positive | 343276 - 344190 | 32704.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
