Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (adenine2030-n6)-methyltransferase | SAMN05216227_10738 | Not Available | Negative | 3634050 - 3634820 | 28586.5 |
| transposase domain | SAMN05216227_10739 | Not Available | Positive | 3635570 - 3635851 | 11107.3 |
| integrase core domain-containing protein | SAMN05216227_10741 | Not Available | Positive | 3636153 - 3636407 | 9726.77 |
| hemolysin-type calcium-binding repeat-containing protein | SAMN05216227_10742 | Not Available | Positive | 3636463 - 3636864 | 13344.8 |
| udp-glucose dehydrogenase | SAMN05216227_10743 | Not Available | Negative | 3637075 - 3638403 | 47857.2 |
| adenylylsulfate kinase /sulfate adenylyltransferase subunit 1 | SAMN05216227_10744 | Not Available | Negative | 3638513 - 3640426 | 69670.4 |
| sulfate adenylyltransferase subunit 2 | SAMN05216227_10745 | Not Available | Negative | 3640427 - 3641362 | 35503.7 |
| ca2+-binding protein, rtx toxin-related | SAMN05216227_10746 | Not Available | Negative | 3641490 - 3643982 | 83945.7 |
| hypothetical protein | SAMN05216227_10747 | Not Available | Negative | 3644086 - 3644383 | 11212.7 |
| integrase core domain-containing protein | SAMN05216227_10751 | Not Available | Positive | 3644384 - 3644699 | 12160.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
