Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr02594 family protein | SAMN05216227_10719 | Not Available | Negative | 3616981 - 3617634 | 23678.4 |
| hypothetical protein | SAMN05216227_107110 | Not Available | Negative | 3617722 - 3618030 | 11595.8 |
| winged helix-turn-helix dna-binding | SAMN05216227_107111 | Not Available | Positive | 3618146 - 3618370 | 8594.54 |
| istb-like atp binding protein | SAMN05216227_10721 | Not Available | Positive | 3618371 - 3618620 | 9080.96 |
| protein of unknown function | SAMN05216227_10722 | Not Available | Negative | 3618688 - 3618903 | 8115.94 |
| hypothetical protein | SAMN05216227_10723 | Not Available | Positive | 3619129 - 3620565 | 52643.3 |
| hypothetical protein | SAMN05216227_10724 | Not Available | Positive | 3620638 - 3620883 | 9053.39 |
| trap-type mannitol/chloroaromatic compound transport system, substrate-binding protein | SAMN05216227_10725 | Not Available | Positive | 3620910 - 3621998 | 39400.9 |
| trap-type mannitol/chloroaromatic compound transport system, small permease component | SAMN05216227_10726 | Not Available | Positive | 3622110 - 3622553 | 16413.8 |
| trap transporter, dctm subunit | SAMN05216227_10727 | Not Available | Positive | 3622550 - 3624100 | 54270.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
