Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase dde domain-containing protein | SAMN05216227_10651 | Not Available | Negative | 3547905 - 3548171 | 10139.2 |
| two-component system, ntrc family, c4-dicarboxylate transport sensor histidine kinase dctb | SAMN05216227_10652 | Not Available | Positive | 3548715 - 3550619 | 68356.0 |
| two-component system, ntrc family, c4-dicarboxylate transport response regulator dctd | SAMN05216227_10653 | Not Available | Positive | 3550616 - 3551965 | 49106.0 |
| hypothetical protein | SAMN05216227_10654 | Not Available | Positive | 3552209 - 3553186 | 34053.4 |
| trap transporter, 4tm/12tm fusion protein | SAMN05216227_10655 | Not Available | Positive | 3553300 - 3555465 | 76224.8 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN05216227_10656 | Not Available | Negative | 3555633 - 3558749 | 108824.0 |
| rnd family efflux transporter, mfp subunit | SAMN05216227_10657 | Not Available | Negative | 3558760 - 3559938 | 40900.0 |
| putative transposase | SAMN05216227_10661 | Not Available | Positive | 3560176 - 3560485 | 11661.9 |
| cadherin domain-containing protein | SAMN05216227_10662 | Not Available | Negative | 3560869 - 3570657 | 355961.0 |
| hypothetical protein | SAMN05216227_10663 | Not Available | Negative | 3570730 - 3571377 | 23744.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
