Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydrogenase | SAMN05216227_10637 | Not Available | Positive | 3528632 - 3529720 | 37682.2 |
| dihydroxy-acid dehydratase | SAMN05216227_10638 | Not Available | Negative | 3530416 - 3532284 | 66426.9 |
| hypothetical protein | SAMN05216227_10639 | Not Available | Positive | 3532744 - 3533607 | 30528.1 |
| protein sco1/2 | SAMN05216227_106310 | Not Available | Negative | 3534244 - 3534819 | 20263.2 |
| hypothetical protein | SAMN05216227_106311 | Not Available | Negative | 3534816 - 3535037 | 7782.52 |
| transposase | SAMN05216227_106312 | Not Available | Positive | 3535412 - 3535616 | 7237.69 |
| putative transposase | SAMN05216227_10641 | Not Available | Positive | 3535617 - 3535926 | 11661.9 |
| integrase core domain-containing protein | SAMN05216227_10642 | Not Available | Positive | 3536108 - 3536320 | 8162.71 |
| glycosyl transferase, family 25 | SAMN05216227_10643 | Not Available | Positive | 3536597 - 3537382 | 30043.1 |
| hypothetical protein | SAMN05216227_10644 | Not Available | Positive | 3537765 - 3538145 | 14059.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
