Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sh3 domain-containing protein | SAMN05216227_106112 | Not Available | Positive | 3502879 - 3507696 | 170095.0 |
| putative transposase | SAMN05216227_106113 | Not Available | Negative | 3508064 - 3508327 | 9978.98 |
| 2,4-diketo-3-deoxy-l-fuconate hydrolase | SAMN05216227_10621 | Not Available | Negative | 3509141 - 3509992 | 30146.4 |
| monosaccharide abc transporter atp-binding protein, cut2 family | SAMN05216227_10622 | Not Available | Negative | 3510102 - 3511607 | 54594.9 |
| monosaccharide abc transporter membrane protein, cut2 family | SAMN05216227_10623 | Not Available | Negative | 3511604 - 3512605 | 35254.9 |
| monosaccharide abc transporter membrane protein, cut2 family | SAMN05216227_10624 | Not Available | Negative | 3512615 - 3513589 | 33818.7 |
| meso-butanediol dehydrogenase / (s,s)-butanediol dehydrogenase / diacetyl reductase | SAMN05216227_10625 | Not Available | Negative | 3513656 - 3514453 | 28165.8 |
| monosaccharide abc transporter substrate-binding protein, cut2 family | SAMN05216227_10626 | Not Available | Negative | 3514534 - 3515484 | 33471.4 |
| carbohydrate abc transporter substrate-binding protein, cut1 family | SAMN05216227_10627 | Not Available | Positive | 3515708 - 3517531 | 66964.0 |
| meso-butanediol dehydrogenase / (s,s)-butanediol dehydrogenase / diacetyl reductase | SAMN05216227_10628 | Not Available | Positive | 3517556 - 3518365 | 29039.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
