Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase, mutator family | SAMN05216227_105818 | Not Available | Negative | 3464408 - 3464797 | 14936.2 |
| hypothetical protein | SAMN05216227_10591 | Not Available | Negative | 3464865 - 3465842 | 35876.0 |
| choline-sulfatase | SAMN05216227_10592 | Not Available | Negative | 3465885 - 3467399 | 57038.2 |
| peptide/nickel transport system substrate-binding protein | SAMN05216227_10593 | Not Available | Positive | 3467855 - 3469450 | 58362.5 |
| peptide/nickel transport system permease protein | SAMN05216227_10594 | Not Available | Positive | 3469453 - 3470409 | 34283.3 |
| peptide/nickel transport system permease protein | SAMN05216227_10595 | Not Available | Positive | 3470423 - 3471235 | 29053.3 |
| peptide/nickel transport system atp-binding protein | SAMN05216227_10596 | Not Available | Positive | 3471232 - 3472863 | 58652.3 |
| type i phosphodiesterase / nucleotide pyrophosphatase | SAMN05216227_10597 | Not Available | Positive | 3472928 - 3473767 | 31246.0 |
| lysr family transcriptional regulator, glycine cleavage system transcriptional activator | SAMN05216227_10598 | Not Available | Negative | 3473753 - 3474682 | 33337.1 |
| nadph2:quinone reductase | SAMN05216227_10599 | Not Available | Negative | 3474783 - 3475748 | 33735.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
