Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted dehydrogenase | SAMN05216227_104512 | Not Available | Positive | 3211299 - 3212432 | 40566.3 |
| transcriptional regulator, laci family | SAMN05216227_104513 | Not Available | Negative | 3212436 - 3213434 | 35277.4 |
| trap-type mannitol/chloroaromatic compound transport system, substrate-binding protein | SAMN05216227_104514 | Not Available | Positive | 3213759 - 3214895 | 41032.0 |
| trap-type mannitol/chloroaromatic compound transport system, small permease component | SAMN05216227_104515 | Not Available | Positive | 3214966 - 3215541 | 21910.9 |
| trap transporter, dctm subunit | SAMN05216227_104516 | Not Available | Positive | 3215586 - 3217010 | 52045.6 |
| asp-trnaasn/glu-trnagln amidotransferase a subunit | SAMN05216227_104517 | Not Available | Positive | 3216994 - 3218364 | 47887.7 |
| hypothetical protein | SAMN05216227_104518 | Not Available | Positive | 3218368 - 3218529 | 5890.64 |
| isocitrate dehydrogenase | SAMN05216227_104519 | Not Available | Positive | 3218683 - 3220911 | 79001.4 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN05216227_104520 | Not Available | Positive | 3221026 - 3221952 | 32260.7 |
| transposase | SAMN05216227_104521 | Not Available | Positive | 3222090 - 3222379 | 10794.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
