Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216227_10452 | Not Available | Positive | 3199391 - 3199765 | 13955.2 |
| hypothetical protein | SAMN05216227_10453 | Not Available | Positive | 3199770 - 3201803 | 71458.7 |
| sugar transferase involved in lps biosynthesis (colanic, teichoic acid) | SAMN05216227_10454 | Not Available | Positive | 3201864 - 3202580 | 25888.9 |
| hemolysin-type calcium-binding repeat-containing protein | SAMN05216227_10455 | Not Available | Positive | 3202605 - 3204560 | 65762.0 |
| fructose-bisphosphate aldolase, class ii | SAMN05216227_10456 | Not Available | Negative | 3204627 - 3205475 | 29310.2 |
| 5-deoxyglucuronate isomerase | SAMN05216227_10457 | Not Available | Negative | 3205472 - 3206311 | 31490.4 |
| 5-dehydro-2-deoxygluconokinase | SAMN05216227_10458 | Not Available | Negative | 3206322 - 3207299 | 33498.9 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase | SAMN05216227_10459 | Not Available | Negative | 3207299 - 3209164 | 66117.9 |
| predicted dehydrogenase | SAMN05216227_104510 | Not Available | Positive | 3209279 - 3210376 | 39167.6 |
| 2-keto-myo-inositol dehydratase | SAMN05216227_104511 | Not Available | Positive | 3210396 - 3211286 | 32483.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
