Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | SAMN05216227_104227 | Not Available | Positive | 3146279 - 3146570 | 10794.0 |
| transposase dde domain-containing protein | SAMN05216227_10431 | Not Available | Negative | 3146571 - 3146833 | 9881.93 |
| hypothetical protein | SAMN05216227_10432 | Not Available | Negative | 3147086 - 3148012 | 35417.4 |
| integrase | SAMN05216227_10433 | Not Available | Negative | 3148041 - 3149228 | 44840.3 |
| Trna-thr | Not Available | Not Available | Positive | 3149394 - 3149469 | Not Available |
| sirohydrochlorin ferrochelatase | SAMN05216227_10435 | Not Available | Positive | 3149677 - 3150273 | 20519.2 |
| uncharacterized membrane protein | SAMN05216227_10436 | Not Available | Negative | 3150437 - 3151126 | 24413.2 |
| uncharacterized conserved protein ydiu, upf0061 family | SAMN05216227_10437 | Not Available | Negative | 3151225 - 3152688 | 52130.6 |
| peptide-methionine (s)-s-oxide reductase | SAMN05216227_10438 | Not Available | Negative | 3152707 - 3153213 | 18816.9 |
| adenosylcobyric acid synthase (glutamine-hydrolysing) | SAMN05216227_10439 | Not Available | Negative | 3153277 - 3154722 | 50329.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
