Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine transport system substrate-binding protein | SAMN05216227_104012 | Not Available | Positive | 3077962 - 3079017 | 38577.1 |
| nad(p)-binding rossmann-like domain-containing protein | SAMN05216227_104013 | Not Available | Positive | 3079087 - 3080238 | 41335.2 |
| nucleotide-binding universal stress protein, uspa family | SAMN05216227_104014 | Not Available | Negative | 3080263 - 3081084 | 28287.5 |
| sulfate permease, sulp family | SAMN05216227_104015 | Not Available | Negative | 3081097 - 3082602 | 53125.2 |
| dna-binding transcriptional regulator, gntr family | SAMN05216227_104016 | Not Available | Positive | 3082761 - 3083444 | 25086.2 |
| formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase | SAMN05216227_104017 | Not Available | Negative | 3083451 - 3083996 | 19015.4 |
| phosphoribosylformylglycinamidine cyclo-ligase | SAMN05216227_104018 | Not Available | Negative | 3084035 - 3085078 | 35491.0 |
| Trna-val | Not Available | Not Available | Positive | 3085225 - 3085299 | Not Available |
| dna-binding protein hu-alpha | SAMN05216227_104020 | Not Available | Negative | 3085312 - 3085785 | 15861.1 |
| atp-dependent proteinase. serine peptidase. merops family s16 | SAMN05216227_104021 | Not Available | Negative | 3085931 - 3088339 | 88013.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
