Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| istb-like atp binding protein | SAMN05216227_103832 | Not Available | Negative | 3035956 - 3036117 | 5867.28 |
| winged helix-turn-helix dna-binding | SAMN05216227_103833 | Not Available | Positive | 3036252 - 3036488 | 9079.13 |
| type i restriction enzyme, s subunit/type i restriction enzyme m protein | SAMN05216227_10391 | Not Available | Positive | 3036489 - 3037343 | 31105.0 |
| hypothetical protein | SAMN05216227_10392 | Not Available | Positive | 3037343 - 3038176 | 31546.7 |
| hypothetical protein | SAMN05216227_10393 | Not Available | Positive | 3038173 - 3038652 | 18236.8 |
| type i restriction enzyme, r subunit | SAMN05216227_10394 | Not Available | Positive | 3038652 - 3042047 | 127007.0 |
| hypothetical protein | SAMN05216227_10395 | Not Available | Positive | 3042521 - 3042820 | 10959.2 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | SAMN05216227_10396 | Not Available | Positive | 3043044 - 3043787 | 27251.9 |
| protein of unknown function | SAMN05216227_10397 | Not Available | Negative | 3044008 - 3045360 | 49748.6 |
| hypothetical protein | SAMN05216227_10398 | Not Available | Positive | 3046266 - 3046514 | 9082.02 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
