Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase inhibitor, kipi family | SAMN05216227_103715 | Not Available | Negative | 2992066 - 2992830 | 26622.1 |
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN05216227_103716 | Not Available | Positive | 2992947 - 2993912 | 33945.4 |
| trap-type mannitol/chloroaromatic compound transport system, small permease component | SAMN05216227_103717 | Not Available | Positive | 2993971 - 2994495 | 18514.1 |
| trap transporter, dctm subunit | SAMN05216227_103718 | Not Available | Positive | 2994495 - 2995790 | 45455.9 |
| predicted transcription regulator, contains hth domain, marr family | SAMN05216227_103719 | Not Available | Negative | 2995794 - 2996309 | 19476.4 |
| hypothetical protein | SAMN05216227_103720 | Not Available | Negative | 2996428 - 2996760 | 11225.0 |
| membrane-anchored ribosome-binding protein, inhibits growth in stationary phase, elab/yqjd/duf883 family | SAMN05216227_103721 | Not Available | Negative | 2996760 - 2997083 | 11043.1 |
| hypothetical protein | SAMN05216227_103722 | Not Available | Positive | 2997235 - 2997405 | 6489.83 |
| two-component sensor histidine kinase, contains hiska and hatpase domains | SAMN05216227_103723 | Not Available | Positive | 2997421 - 2999208 | 63390.2 |
| uncharacterized membrane protein ytja, upf0391 family | SAMN05216227_103724 | Not Available | Positive | 2999297 - 2999470 | 5895.65 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
