Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05216227_10375 | Not Available | Positive | 2983072 - 2983638 | 20240.0 |
| uncharacterized conserved protein yjbj, upf0337 family | SAMN05216227_10376 | Not Available | Positive | 2983729 - 2983926 | 7579.81 |
| predicted purr-regulated permease perm | SAMN05216227_10377 | Not Available | Negative | 2984035 - 2985072 | 36459.6 |
| hypothetical protein | SAMN05216227_10378 | Not Available | Positive | 2985204 - 2985458 | 8714.29 |
| hypothetical protein | SAMN05216227_10379 | Not Available | Positive | 2985518 - 2986831 | 45686.0 |
| hypothetical protein | SAMN05216227_103710 | Not Available | Positive | 2986831 - 2987589 | 26530.0 |
| dna ligase-1 | SAMN05216227_103711 | Not Available | Negative | 2987593 - 2989155 | 57317.8 |
| putative mrna 3-end processing factor | SAMN05216227_103712 | Not Available | Negative | 2989155 - 2990177 | 36940.3 |
| upf0271 protein | SAMN05216227_103713 | Not Available | Negative | 2990263 - 2991030 | 26817.2 |
| allophanate hydrolase | SAMN05216227_103714 | Not Available | Negative | 2991044 - 2992069 | 35329.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
