Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine transport system permease protein | SAMN05216227_103623 | Not Available | Positive | 2963982 - 2964788 | 29089.7 |
| spermidine/putrescine transport system atp-binding protein | SAMN05216227_103624 | Not Available | Positive | 2964785 - 2965885 | 39934.6 |
| transcriptional regulator, tetr family | SAMN05216227_103625 | Not Available | Negative | 2966049 - 2966666 | 21806.2 |
| polyphosphate kinase 2, pa0141 family | SAMN05216227_103626 | Not Available | Negative | 2966659 - 2967528 | 33012.6 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05216227_103627 | Not Available | Negative | 2967587 - 2968546 | 33608.7 |
| homoserine o-succinyltransferase | SAMN05216227_103628 | Not Available | Negative | 2968521 - 2969438 | 34790.4 |
| hypothetical protein | SAMN05216227_103629 | Not Available | Negative | 2969440 - 2970315 | 32792.9 |
| zc3h12a-like ribonuclease nyn domain-containing protein | SAMN05216227_103630 | Not Available | Positive | 2970441 - 2970998 | 19926.2 |
| long-chain fatty acid transport protein | SAMN05216227_103631 | Not Available | Negative | 2971053 - 2972147 | 38693.0 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN05216227_103632 | Not Available | Negative | 2972262 - 2973263 | 35561.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
