Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| capsular polysaccharide transport system permease protein | SAMN05216227_10363 | Not Available | Negative | 2947856 - 2949490 | 60119.1 |
| capsular polysaccharide transport system atp-binding protein | SAMN05216227_10364 | Not Available | Negative | 2949468 - 2950127 | 24646.7 |
| sodium/proton antiporter, nhaa family | SAMN05216227_10365 | Not Available | Negative | 2950296 - 2951543 | 44568.9 |
| hypothetical protein | SAMN05216227_10366 | Not Available | Positive | 2951709 - 2952503 | 27270.5 |
| lsu ribosomal protein l13p | SAMN05216227_10367 | Not Available | Positive | 2952656 - 2953120 | 17012.7 |
| ssu ribosomal protein s9p | SAMN05216227_10368 | Not Available | Positive | 2953123 - 2953611 | 17308.3 |
| t5orf172 domain-containing protein | SAMN05216227_10369 | Not Available | Positive | 2953781 - 2954416 | 24080.3 |
| phage integrase family protein | SAMN05216227_103610 | Not Available | Positive | 2954423 - 2955919 | 57999.1 |
| hypothetical protein | SAMN05216227_103611 | Not Available | Negative | 2956109 - 2956555 | 16666.2 |
| integrase/recombinase xerd | SAMN05216227_103612 | Not Available | Negative | 2956595 - 2957170 | 20965.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
