Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proline racemase | SAMN05216227_103514 | Not Available | Negative | 2932095 - 2933123 | 36612.1 |
| predicted aconitase subunit 1 | SAMN05216227_103515 | Not Available | Negative | 2933127 - 2934797 | 58227.3 |
| 4-hydroxyproline epimerase | SAMN05216227_103516 | Not Available | Negative | 2934794 - 2935717 | 33124.8 |
| d-amino-acid dehydrogenase | SAMN05216227_103517 | Not Available | Negative | 2935807 - 2937030 | 42775.6 |
| amino acid abc transporter atp-binding protein, paat family | SAMN05216227_103518 | Not Available | Negative | 2937041 - 2937763 | 26144.9 |
| amino acid abc transporter membrane protein 2, paat family | SAMN05216227_103519 | Not Available | Negative | 2937756 - 2938409 | 24190.2 |
| amino acid abc transporter membrane protein 1, paat family | SAMN05216227_103520 | Not Available | Negative | 2938425 - 2939090 | 24570.6 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN05216227_103521 | Not Available | Negative | 2939162 - 2939971 | 29017.7 |
| nadp-dependent aldehyde dehydrogenase | SAMN05216227_103522 | Not Available | Negative | 2940098 - 2941606 | 52002.3 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN05216227_103523 | Not Available | Negative | 2941711 - 2942661 | 33610.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
