Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxythreonine-4-phosphate dehydrogenase | SAMN05216227_103335 | Not Available | Positive | 2867654 - 2868670 | 36046.2 |
| l-alanine-dl-glutamate epimerase | SAMN05216227_103336 | Not Available | Positive | 2868684 - 2869859 | 43896.6 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN05216227_103337 | Not Available | Positive | 2869856 - 2870767 | 32830.9 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | SAMN05216227_103338 | Not Available | Positive | 2870950 - 2871981 | 37076.4 |
| nadp-dependent aldehyde dehydrogenase | SAMN05216227_103339 | Not Available | Positive | 2872033 - 2873538 | 52784.9 |
| dihydroxy-acid dehydratase | SAMN05216227_103340 | Not Available | Negative | 2874357 - 2876282 | 68402.1 |
| hypothetical protein | SAMN05216227_103341 | Not Available | Positive | 2876730 - 2877593 | 30675.9 |
| integrase core domain-containing protein | SAMN05216227_103342 | Not Available | Negative | 2877801 - 2878136 | 12995.2 |
| transposase is66 family protein | SAMN05216227_10341 | Not Available | Positive | 2878137 - 2878405 | 10095.2 |
| hypothetical protein | SAMN05216227_10342 | Not Available | Negative | 2878450 - 2879592 | 41482.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
