Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216227_103325 | Not Available | Negative | 2859011 - 2859436 | 15222.5 |
| hypothetical protein | SAMN05216227_103326 | Not Available | Negative | 2859433 - 2859702 | 10580.8 |
| helix-turn-helix domain-containing protein | SAMN05216227_103327 | Not Available | Negative | 2859699 - 2859956 | 10023.9 |
| site-specific recombinase xerd | SAMN05216227_103328 | Not Available | Positive | 2860524 - 2861825 | 48582.5 |
| hypothetical protein | SAMN05216227_103329 | Not Available | Negative | 2861806 - 2862417 | 22682.1 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN05216227_103330 | Not Available | Positive | 2862689 - 2863609 | 35517.1 |
| dna-binding transcriptional regulator, gntr family | SAMN05216227_103331 | Not Available | Negative | 2863960 - 2864613 | 24656.6 |
| tripartite atp-independent transporter solute receptor, dctp family | SAMN05216227_103332 | Not Available | Positive | 2864768 - 2865751 | 35526.0 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN05216227_103333 | Not Available | Positive | 2865817 - 2866380 | 20585.5 |
| trap transporter, dctm subunit | SAMN05216227_103334 | Not Available | Positive | 2866377 - 2867657 | 44648.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
