Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacteriorhodopsin | SAMN05216227_103315 | Not Available | Positive | 2849867 - 2850643 | 28056.2 |
| geranylgeranyl diphosphate synthase, type ii | SAMN05216227_103316 | Not Available | Positive | 2850761 - 2851558 | 27376.5 |
| phytoene desaturase | SAMN05216227_103317 | Not Available | Positive | 2851548 - 2853056 | 55541.5 |
| phytoene synthase | SAMN05216227_103318 | Not Available | Positive | 2853053 - 2853904 | 30337.7 |
| lycopene beta-cyclase | SAMN05216227_103319 | Not Available | Positive | 2853891 - 2855000 | 40431.2 |
| beta-carotene 15,15'-monooxygenase, brp/blh family | SAMN05216227_103320 | Not Available | Positive | 2854997 - 2855881 | 31634.2 |
| hypothetical protein | SAMN05216227_103321 | Not Available | Negative | 2856064 - 2856720 | 24100.3 |
| hypothetical protein | SAMN05216227_103322 | Not Available | Negative | 2856717 - 2857463 | 27024.3 |
| hypothetical protein | SAMN05216227_103323 | Not Available | Positive | 2857597 - 2858079 | 16269.2 |
| helix-turn-helix domain-containing protein | SAMN05216227_103324 | Not Available | Negative | 2857980 - 2859014 | 39008.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
