Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific recombinase xerd | SAMN05216227_103226 | Not Available | Positive | 2833663 - 2834922 | 47471.6 |
| hypothetical protein | SAMN05216227_103227 | Not Available | Negative | 2834936 - 2835547 | 22842.4 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN05216227_103228 | Not Available | Positive | 2835735 - 2836727 | 36923.1 |
| predicted atp-dependent endonuclease of the old family, contains p-loop atpase and toprim domains | SAMN05216227_103229 | Not Available | Positive | 2837090 - 2839357 | 83397.1 |
| dna helicase-2 / atp-dependent dna helicase pcra | SAMN05216227_103230 | Not Available | Positive | 2839354 - 2841276 | 70737.3 |
| transposase is66 family protein | SAMN05216227_103231 | Not Available | Negative | 2841498 - 2841790 | 11034.4 |
| transposase domain | SAMN05216227_10331 | Not Available | Negative | 2841791 - 2842056 | 10325.3 |
| hypothetical protein | SAMN05216227_10332 | Not Available | Negative | 2842078 - 2842248 | 6063.34 |
| nucleotidyltransferase | SAMN05216227_10333 | Not Available | Negative | 2842368 - 2842646 | 10007.9 |
| hypothetical protein | SAMN05216227_10334 | Not Available | Negative | 2842592 - 2842840 | 8717.62 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
