Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-val | Not Available | Not Available | Positive | 187058 - 187132 | Not Available |
| n-formylglutamate amidohydrolase | SAMN05216227_1001199 | Not Available | Positive | 187446 - 188321 | 31917.9 |
| alternative oxidase | SAMN05216227_1001200 | Not Available | Positive | 188404 - 189081 | 25466.6 |
| helix-turn-helix domain-containing protein | SAMN05216227_1001201 | Not Available | Positive | 189209 - 189487 | 9960.09 |
| transposase dde domain-containing protein | SAMN05216227_10021 | Not Available | Negative | 189605 - 189805 | 7627.15 |
| microcin-processing peptidase 2. unknown type peptidase. merops family u62 | SAMN05216227_10022 | Not Available | Negative | 190054 - 191475 | 49742.4 |
| cytochrome c oxidase subunit 2 | SAMN05216227_10023 | Not Available | Positive | 191644 - 192486 | 30866.4 |
| protoheme ix farnesyltransferase | SAMN05216227_10024 | Not Available | Positive | 192542 - 193471 | 33190.6 |
| hypothetical protein | SAMN05216227_10025 | Not Available | Positive | 193473 - 193688 | 8001.93 |
| cytochrome c oxidase assembly protein subunit 11 | SAMN05216227_10026 | Not Available | Positive | 193685 - 194257 | 20870.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
