Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase core domain-containing protein | SAMN05216227_102651 | Not Available | Negative | 2609507 - 2609889 | 14854.7 |
| transposase | SAMN05216227_10271 | Not Available | Negative | 2609890 - 2610079 | 6735.09 |
| hypothetical protein | SAMN05216227_10272 | Not Available | Negative | 2610254 - 2610748 | 18291.8 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN05216227_10273 | Not Available | Positive | 2610917 - 2611267 | 12148.5 |
| glucose-6-phosphate isomerase | SAMN05216227_10274 | Not Available | Negative | 2611300 - 2612913 | 57493.1 |
| 6-phosphogluconolactonase | SAMN05216227_10275 | Not Available | Negative | 2612918 - 2613589 | 23700.6 |
| glucose-6-phosphate 1-dehydrogenase | SAMN05216227_10276 | Not Available | Negative | 2613586 - 2615040 | 54122.9 |
| 3-hydroxyisobutyrate dehydrogenase | SAMN05216227_10277 | Not Available | Negative | 2615274 - 2616137 | 29354.4 |
| penicillin amidase | SAMN05216227_10278 | Not Available | Positive | 2616219 - 2618678 | 89537.4 |
| gtp-binding protein hflx | SAMN05216227_10279 | Not Available | Negative | 2618699 - 2620030 | 48718.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
