Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| (r)-ethylmalonyl-coa mutase | SAMN05216227_102534 | Not Available | Negative | 2548315 - 2550276 | 70860.8 |
| crotonyl-coa carboxylase/reductase | SAMN05216227_102535 | Not Available | Positive | 2550551 - 2551843 | 47578.8 |
| hypothetical protein | SAMN05216227_102536 | Not Available | Positive | 2552035 - 2552235 | 7163.47 |
| exodeoxyribonuclease-5 | SAMN05216227_102537 | Not Available | Positive | 2552313 - 2553836 | 55422.7 |
| transcriptional regulator, asnc family | SAMN05216227_102538 | Not Available | Positive | 2553891 - 2554127 | 8738.41 |
| dihydroorotate oxidase a | SAMN05216227_102539 | Not Available | Negative | 2554210 - 2555268 | 36687.3 |
| uncharacterized conserved protein, duf952 family | SAMN05216227_102540 | Not Available | Negative | 2555265 - 2555633 | 13490.2 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family | SAMN05216227_102541 | Not Available | Positive | 2555872 - 2557389 | 52450.2 |
| putative sos response-associated peptidase yedk | SAMN05216227_102542 | Not Available | Positive | 2557498 - 2558142 | 22793.5 |
| Trna-gly | Not Available | Not Available | Positive | 2558199 - 2558272 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
