Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide/nickel transport system atp-binding protein | SAMN05216227_102321 | Not Available | Negative | 2439566 - 2440303 | 26708.3 |
| peptide/nickel transport system atp-binding protein | SAMN05216227_102322 | Not Available | Negative | 2440300 - 2441163 | 31822.0 |
| peptide/nickel transport system permease protein | SAMN05216227_102323 | Not Available | Negative | 2441160 - 2442068 | 32357.3 |
| peptide/nickel transport system permease protein | SAMN05216227_102324 | Not Available | Negative | 2442081 - 2443139 | 38167.5 |
| peptide/nickel transport system substrate-binding protein | SAMN05216227_102325 | Not Available | Negative | 2443139 - 2444734 | 58450.8 |
| membrane dipeptidase | SAMN05216227_102326 | Not Available | Negative | 2444777 - 2445838 | 38012.7 |
| transcriptional regulator, lysr family | SAMN05216227_102327 | Not Available | Positive | 2445952 - 2446860 | 33559.3 |
| glycine/d-amino acid oxidase | SAMN05216227_102328 | Not Available | Negative | 2446864 - 2448063 | 43696.9 |
| Trna-gln | Not Available | Not Available | Positive | 2448140 - 2448214 | Not Available |
| hypothetical protein | SAMN05216227_102330 | Not Available | Positive | 2448343 - 2449518 | 41333.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
