Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudorhodobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudorhodobacter |
| Species | Pseudorhodobacter antarcticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Antarctic intertidal sandy sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
768526 bp
Thymine Count
781293 bp
Guanine Count
1132698 bp
Cytosine Count
1114275 bp
Genome Length
3796802 bp
Protein-coding Genes
3770 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transfer flavoprotein beta subunit | SAMN05216227_102230 | Not Available | Positive | 2397903 - 2398664 | 26919.0 |
| electron transfer flavoprotein alpha subunit apoprotein | SAMN05216227_102231 | Not Available | Positive | 2398664 - 2399590 | 31023.2 |
| hypothetical protein | SAMN05216227_102232 | Not Available | Negative | 2399643 - 2400476 | 30628.7 |
| 3-hydroxyacyl-coa dehydrogenase | SAMN05216227_102233 | Not Available | Positive | 2400663 - 2401538 | 31900.8 |
| phosphocarrier protein | SAMN05216227_102234 | Not Available | Negative | 2401542 - 2401811 | 9452.38 |
| pts system, mannose-specific iia component | SAMN05216227_102235 | Not Available | Negative | 2401808 - 2402212 | 14136.2 |
| upf0042 nucleotide-binding protein | SAMN05216227_102236 | Not Available | Negative | 2402219 - 2403124 | 32867.5 |
| hpr(ser) kinase/phosphatase | SAMN05216227_102237 | Not Available | Negative | 2403146 - 2403559 | 14497.8 |
| two-component system, ompr family, sensor histidine kinase chvg | SAMN05216227_102238 | Not Available | Negative | 2403564 - 2405291 | 61679.2 |
| two component transcriptional regulator, winged helix family | SAMN05216227_102239 | Not Available | Negative | 2405301 - 2406002 | 26893.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
